![](\"https:\/\/bioinfo.iric.ca\/wpbioinfo\/wp-content\/uploads\/2021\/05\/logo.png\" "\\"logo\\""){kind=logo}
<\/span><\/div><\/div><\/div>Un outil en ligne de commande d\u00e9velopp\u00e9 pour classer les meilleurs g\u00e8nes pr\u00e9dictifs (PG) et am\u00e9liorer la d\u00e9tection des biomarqueurs. Pour cela, EPCY \u00e9value le potentiel pr\u00e9dictif de chaque expression de g\u00e8nes.<\/p>\n
Publication:<\/p>\n
- \n
- EPCY: Evaluation of Predictive CapabilitY for ranking biomarker gene candidates. Poster at ISMB ECCB 2019: https:\/\/f1000research.com\/posters\/8-1349<\/a><\/li>\n<\/ul>\n
Links: Git<\/a>, PyPI<\/a>, Docs<\/a><\/span><\/p>\n<\/div>\n<\/div>
<\/div><\/div><\/div><\/div><\/div><\/div>![](\"https:\/\/bioinfo.iric.ca\/wpbioinfo\/wp-content\/uploads\/2021\/05\/km.png\" "\\"km\\"")
<\/span><\/div><\/div><\/div>Un outil en ligne de commande d\u00e9velopp\u00e9 pour identifier et quantifier des <\/span><\/span>polymorphismes nucl\u00e9otidiques, insertions, d\u00e9l\u00e9tions et duplications \u00e0 partir de donn\u00e9es de s\u00e9quen\u00e7age ARN.<\/span><\/span><\/p>\n
\nPublications:<\/p>\n
- \n
- Targeted variant detection using unaligned RNA-Seq reads. Life science Alliance 2019 Aug 19;2(4); doi: https:\/\/doi.org\/10.26508\/lsa.201900336<\/a><\/li>\n
- Target variant detection in leukemia using unaligned RNA-Seq reads. bioRxiv 295808; doi: https:\/\/doi.org\/10.1101\/295808<\/a><\/li>\n<\/ul>\n
Links: Git<\/a><\/span><\/p>\n<\/div>\n<\/div>
<\/div><\/div><\/div><\/div><\/div><\/div>![](\"https:\/\/bioinfo.iric.ca\/wpbioinfo\/wp-content\/uploads\/2021\/05\/MiSTIC.png\" "\\"MiSTIC\\"")
<\/span><\/div><\/div><\/div>Logiciel int\u00e9gratif con\u00e7u pour fournir une interface permettant de visualiser et d’interroger de grands ensembles de donn\u00e9es, notamment des donn\u00e9es issues de s\u00e9quen\u00e7age, des dossiers cliniques et des r\u00e9ponses aux compos\u00e9s chimiques.<\/span><\/p>\n
\n- \n<\/ul>\n
- MiSTIC, an integrated platform for the analysis of heterogeneity in large tumour transcriptome datasets. Nucleic Acids Res. 2017, https:\/\/doi.org\/10.1093\/nar\/gkx338<\/a>, PMID: 28472340<\/span><\/li>\n<\/ul>\n
Links: Git<\/a>, Public version<\/a>, Demo<\/a><\/span><\/p>\n
<\/span><\/p>\n- \n<\/ul>\n<\/div>\n<\/div>\n<\/div><\/div><\/div><\/div><\/div><\/p>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":3,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"jetpack_post_was_ever_published":false,"footnotes":""},"class_list":["post-100023","page","type-page","status-publish","hentry"],"jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/bioinfo.iric.ca\/fr\/wp-json\/wp\/v2\/pages\/100023","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/bioinfo.iric.ca\/fr\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/bioinfo.iric.ca\/fr\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/bioinfo.iric.ca\/fr\/wp-json\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/bioinfo.iric.ca\/fr\/wp-json\/wp\/v2\/comments?post=100023"}],"version-history":[{"count":4,"href":"https:\/\/bioinfo.iric.ca\/fr\/wp-json\/wp\/v2\/pages\/100023\/revisions"}],"predecessor-version":[{"id":100089,"href":"https:\/\/bioinfo.iric.ca\/fr\/wp-json\/wp\/v2\/pages\/100023\/revisions\/100089"}],"wp:attachment":[{"href":"https:\/\/bioinfo.iric.ca\/fr\/wp-json\/wp\/v2\/media?parent=100023"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}
\nPublication:<\/p>\n
- \n
- Target variant detection in leukemia using unaligned RNA-Seq reads. bioRxiv 295808; doi: https:\/\/doi.org\/10.1101\/295808<\/a><\/li>\n<\/ul>\n
- Targeted variant detection using unaligned RNA-Seq reads. Life science Alliance 2019 Aug 19;2(4); doi: https:\/\/doi.org\/10.26508\/lsa.201900336<\/a><\/li>\n