Latest Blog Posts
Document your work by adding parameters to your shell scripts
At some point during your bioinformatics career, you're going to start writing shell scripts, it's kind of inevitable ! So let us discuss a strategy to add parameters to your scripts in order make them [...]
A word about unwanted variability
Experiments are influenced by various variables: the one we are interested in, and many others. Variability in the data can be related to differences in technical or biological variables, such as the instrument used, genetic [...]
Understanding how kallisto works
In 2016, Bray et al. introduced a new k-mer based method to estimate isoform abundance from RNA-Seq data. Their method, called kallisto, provided a significant improvement in speed and memory usage compared to the previously [...]